# Containers required for the benchmark analysis in the paper.
# Tools
jdidion/atropos_paper
jdidion/skewer
jdidion/seqpurge
jdidion/adapterremoval
jdidion/fastp
jdidion/cutadapt
# Reference
jdidion/hg38_reference
# Tools with references/indexes
jdidion/bwameth_hg38index
jdidion/star_hg38index
# Support
jdidion/python_bash
jdidion/atropos_paper_analysis
# Data
jdidion/atropos_simulated
jdidion/atropos_wgbs
jdidion/atropos_rnaseq
