14d8170c06c4fb7550e9ec33db7103e5 *DESCRIPTION
e04a9b51587867b89e1cd849ccc852d7 *NAMESPACE
71cffd5f2374ff394e8a35da7f563b6a *NEWS
b8bdcb6458e6ad5d27a721c25cce2e18 *R/annotation.R
d1f76bcd6fde45b49c16af9f0ff4f0e7 *R/auto_annotate.R
2a8e3a81fbac1c94177149537e3f570c *R/color_schemes.R
aa3478c76f87d411261a16e5526024da *R/comparison.R
195d0c8ebb6fc7ee2a20b8515f69338b *R/dna_seg.R
2f3d56c7c725ea7526ac95b4933cc96b *R/gene.R
74369c28b502fcea29a3a645dd11ce57 *R/gene_types.R
96955f2afd4e5f8f580b0309c28ee84c *R/generic.R
84b3b8c0ee236aeed6e38d25d00468a2 *R/genoPlotR.R
fb9ed05c1283b5e92062c062ab59b311 *R/grobs.R
c9c7d98666cae9cec125d17f0993d157 *R/minimize_comps.R
3fae1f62a6fe76c555d4863f5bd8f735 *R/phylog_grob.R
4f95f43c2f9f839dec4591280f8c58a0 *R/plot_helpers.R
efd263612b4ae459b52f7675a7cd8c72 *R/read_comparison.R
707b134720e0deb6267b4980d8049ca0 *R/read_dna_seg.R
0052bd49236e23a3ce502ba0b3aa8de3 *R/read_mauve_backbone.R
264c0020b09a13824be4cf90a763a2c0 *R/seg_plot.R
561ad39a1b5bcb6e550ff8b3d671e613 *R/similarity.R
412e7fe7a9776d87e4400be09720d559 *build/partial.rdb
27ab10129fa18dc9425bc8c79ce33fa6 *build/vignette.rds
775e28c2881d9c82e7d6529de4b69147 *data/barto.RData
60db84c7bff788057b782c8bde3847e3 *data/chrY_subseg.RData
01cc20cf13cdd165eb5b99cd0111f2ad *data/mauve_bbone.RData
1269782051dd3f0d0432e80620831172 *data/three_genes.RData
d8844300124ba1c2f192b9e3f6a6a7cb *inst/CITATION
d7265266ad496b4c2adb7e608886f13a *inst/doc/genoPlotR.R
4cf631faa427a09c7a5bea5eaa64c7d9 *inst/doc/genoPlotR.Rnw
a8a23e6219d0b2b4172a0c0b02c77986 *inst/doc/genoPlotR.pdf
7cd8c42353269870d75693a439c79dbb *inst/extdata/BG_plasmid.embl
a4e9ad88309038e8d27e0a767b940de3 *inst/extdata/BG_plasmid.gbk
1a7b20d4ea2ce6aeb037614058709c44 *inst/extdata/BH_vs_BQ.blastn.tab
eb2963b09a7f630ee514c75ba679998c *inst/extdata/BQ.ptt
cb530cd62aa51769aa3d85e347b84cad *inst/extdata/barto.backbone
941231c2ae9e15621cc37806ef634b12 *inst/extdata/barto.guide_tree
948659846974ea3daa4a5d4d1517a612 *inst/extdata/barto.sh
9da3987fc27aed710b19348c68281bbe *inst/extdata/comparison2.tab
1095d1cb208dbeac03d9e6a8a12e699d *inst/extdata/dna_seg3.tab
a48d7360e71703a6e77a8f6961d358a4 *inst/extdata/mauve.sh
22e10554fe57216d83a4dc1d133dcc21 *man/annotation.Rd
d9751d3cced357e8bcb37c1eb5b31185 *man/apply_color_scheme.Rd
42784e1e43ce4b1ab2b74c3d83079a1c *man/artemisColors.Rd
0bfbd870c75ed51a3a9468c601d58304 *man/auto_annotate.Rd
3cc0ffef8e5a98bf7139bdf4fe205532 *man/barto.Rd
442c70a5266a95e6db5148a1d283755d *man/c.dna_seg.Rd
a3b512b82c165ec86bfe39cb3f44929f *man/chrY_subseg.Rd
fb37a206d7fd910da1266d334e91eeba *man/comparison.Rd
21051c651043b2e5c466e229172b3d09 *man/dna_seg.Rd
63585170ae788090f60094a0424bcc4a *man/gene_types.Rd
7b49fffadb3d8cd118d499d317a8893b *man/genoPlotR-package.Rd
fbcd62784acb7fcdba1e944984962a3f *man/human_nt.Rd
b921c7b00d638c2ebd8f304d75ac9774 *man/mauve_bbone.Rd
5440c9f82874e86b0330b48e63003999 *man/middle.Rd
5e0338dd42105dc2f94d196d291f4452 *man/plot_gene_map.Rd
007104040a18314e4444cc6a6750169c *man/range.Rd
73779d903cf0189b882a8d26fc9f458f *man/read_functions.Rd
941953bbe193ec974514d027533c7d98 *man/reverse.Rd
fca3cacc0cc5d80c11d32ebd931a3dff *man/seg_plot.Rd
721927fc34af8ff71bb830cd21e44c23 *man/three_genes.Rd
db3931514732ea13a306956faeb0937d *man/trim.Rd
03913d715e7b2db681d46ddb5a643173 *vignettes/Bioinformatics-2010-Guy-2334-5.pdf
4cf631faa427a09c7a5bea5eaa64c7d9 *vignettes/genoPlotR.Rnw
